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1.

An essential role for the Zn²⁺ transporter ZIP7 in B cell development.

Anzilotti, Consuelo; Swan, David J; Boisson, Bertrand; Deobagkar-Lele, Mukta; Oliveira, Catarina; Chabosseau, Pauline; Engelhardt, Karin R; Xu, Xijin; Chen, Rui; Alvarez, Luis; Berlinguer-Palmini, Rolando; Bull, Katherine R; Cawthorne, Eleanor; Cribbs, Adam P; Crockford, Tanya L; Dang, Tarana Singh; Fearn, Amy; Fenech, Emma J; de Jong, Sarah J; Lagerholm, B Christoffer; Ma, Cindy S; Sims, David; van den Berg, Bert; Xu, Yaobo; Cant, Andrew J; Kleiner, Gary; Leahy, T Ronan; de la Morena, M Teresa; Puck, Jennifer M; Shapiro, Ralph S; van der Burg, Mirjam; Chapman, J Ross; Christianson, John C; Davies, Benjamin; McGrath, John A; Przyborski, Stefan; Santibanez Koref, Mauro; Tangye, Stuart G; Werner, Andreas; Rutter, Guy A; Padilla-Parra, Sergi; Casanova, Jean-Laurent; Cornall, Richard J; Conley, Mary Ellen; Hambleton, Sophie.

Nat Immunol; 20(3): 350-361, 2019 03.

Artículo en Inglés | MEDLINE | ID: mdl-30718914

2.

Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass.

Lovell, John T; MacQueen, Alice H; Mamidi, Sujan; Bonnette, Jason; Jenkins, Jerry; Napier, Joseph D; Sreedasyam, Avinash; Healey, Adam; Session, Adam; Shu, Shengqiang; Barry, Kerrie; Bonos, Stacy; Boston, LoriBeth; Daum, Christopher; Deshpande, Shweta; Ewing, Aren; Grabowski, Paul P; Haque, Taslima; Harrison, Melanie; Jiang, Jiming; Kudrna, Dave; Lipzen, Anna; Pendergast, Thomas H; Plott, Chris; Qi, Peng; Saski, Christopher A; Shakirov, Eugene V; Sims, David; Sharma, Manoj; Sharma, Rita; Stewart, Ada; Singan, Vasanth R; Tang, Yuhong; Thibivillier, Sandra; Webber, Jenell; Weng, Xiaoyu; Williams, Melissa; Wu, Guohong Albert; Yoshinaga, Yuko; Zane, Matthew; Zhang, Li; Zhang, Jiyi; Behrman, Kathrine D; Boe, Arvid R; Fay, Philip A; Fritschi, Felix B; Jastrow, Julie D; Lloyd-Reilley, John; Martínez-Reyna, Juan Manuel; Matamala, Roser.

Nature; 590(7846): 438-444, 2021 02.

Artículo en Inglés | MEDLINE | ID: mdl-33505029

3.

Co-transcriptional Loading of RNA Export Factors Shapes the Human Transcriptome.

Viphakone, Nicolas; Sudbery, Ian; Griffith, Llywelyn; Heath, Catherine G; Sims, David; Wilson, Stuart A.

Mol Cell; 75(2): 310-323.e8, 2019 07 25.

Artículo en Inglés | MEDLINE | ID: mdl-31104896

4.

Linking vertical movements of large pelagic predators with distribution patterns of biomass in the open ocean.

Braun, Camrin D; Della Penna, Alice; Arostegui, Martin C; Afonso, Pedro; Berumen, Michael L; Block, Barbara A; Brown, Craig A; Fontes, Jorge; Furtado, Miguel; Gallagher, Austin J; Gaube, Peter; Golet, Walter J; Kneebone, Jeff; Macena, Bruno C L; Mucientes, Gonzalo; Orbesen, Eric S; Queiroz, Nuno; Shea, Brendan D; Schratwieser, Jason; Sims, David W; Skomal, Gregory B; Snodgrass, Derke; Thorrold, Simon R.

Proc Natl Acad Sci U S A; 120(47): e2306357120, 2023 Nov 21.

Artículo en Inglés | MEDLINE | ID: mdl-38150462

5.

Detailed Analysis of ITPR1 Missense Variants Guides Diagnostics and Therapeutic Design.

Tolonen, Jussi Pekka; Parolin Schnekenberg, Ricardo; McGowan, Simon; Sims, David; McEntagart, Meriel; Elmslie, Frances; Shears, Debbie; Stewart, Helen; Tofaris, George K; Dabir, Tabib; Morrison, Patrick J; Johnson, Diana; Hadjivassiliou, Marios; Ellard, Sian; Shaw-Smith, Charles; Znaczko, Anna; Dixit, Abhijit; Suri, Mohnish; Sarkar, Ajoy; Harrison, Rachel E; Jones, Gabriela; Houlden, Henry; Ceravolo, Giorgia; Jarvis, Joanna; Williams, Jonathan; Shanks, Morag E; Clouston, Penny; Rankin, Julia; Blumkin, Lubov; Lerman-Sagie, Tally; Ponger, Penina; Raskin, Salmo; Granath, Katariina; Uusimaa, Johanna; Conti, Hector; McCann, Emma; Joss, Shelagh; Blakes, Alexander J M; Metcalfe, Kay; Kingston, Helen; Bertoli, Marta; Kneen, Rachel; Lynch, Sally Ann; Martínez Albaladejo, Inmaculada; Moore, Austen Peter; Jones, Wendy D; Becker, Esther B E; Németh, Andrea H.

Mov Disord; 39(1): 141-151, 2024 Jan.

Artículo en Inglés | MEDLINE | ID: mdl-37964426

6.

Four steps to curb 'ocean roadkill'.

Womersley, Freya C; Loveridge, Alexandra; Sims, David W.

Nature; 621(7977): 34-38, 2023 Sep.

Artículo en Inglés | MEDLINE | ID: mdl-37673985

7.

Building use-inspired species distribution models: Using multiple data types to examine and improve model performance.

Braun, Camrin D; Arostegui, Martin C; Farchadi, Nima; Alexander, Michael; Afonso, Pedro; Allyn, Andrew; Bograd, Steven J; Brodie, Stephanie; Crear, Daniel P; Culhane, Emmett F; Curtis, Tobey H; Hazen, Elliott L; Kerney, Alex; Lezama-Ochoa, Nerea; Mills, Katherine E; Pugh, Dylan; Queiroz, Nuno; Scott, James D; Skomal, Gregory B; Sims, David W; Thorrold, Simon R; Welch, Heather; Young-Morse, Riley; Lewison, Rebecca L.

Ecol Appl; 33(6): e2893, 2023 09.

Artículo en Inglés | MEDLINE | ID: mdl-37285072

8.

An ontogenetic switch drives the positive and negative selection of B cells.

Xu, Xijin; Deobagkar-Lele, Mukta; Bull, Katherine R; Crockford, Tanya L; Mead, Adam J; Cribbs, Adam P; Sims, David; Anzilotti, Consuelo; Cornall, Richard J.

Proc Natl Acad Sci U S A; 117(7): 3718-3727, 2020 02 18.

Artículo en Inglés | MEDLINE | ID: mdl-32019891

9.

Direct measurement of cruising and burst swimming speeds of the shortfin mako shark (Isurus oxyrinchus) with estimates of field metabolic rate.

Waller, Matt J; Queiroz, Nuno; da Costa, Ivo; Cidade, Tiago; Loureiro, Bruno; Womersley, Freya C; Fontes, Jorge; Afonso, Pedro; Macena, Bruno C L; Loveridge, Alexandra; Humphries, Nicolas E; Southall, Emily J; Sims, David W.

J Fish Biol; 103(5): 864-883, 2023 Nov.

Artículo en Inglés | MEDLINE | ID: mdl-37395550

10.

Correction of amyotrophic lateral sclerosis related phenotypes in induced pluripotent stem cell-derived motor neurons carrying a hexanucleotide expansion mutation in C9orf72 by CRISPR/Cas9 genome editing using homology-directed repair.

Ababneh, Nidaa A; Scaber, Jakub; Flynn, Rowan; Douglas, Andrew; Barbagallo, Paola; Candalija, Ana; Turner, Martin R; Sims, David; Dafinca, Ruxandra; Cowley, Sally A; Talbot, Kevin.

Hum Mol Genet; 29(13): 2200-2217, 2020 08 03.

Artículo en Inglés | MEDLINE | ID: mdl-32504093

11.

Exhausted CD4⁺ T Cells during Malaria Exhibit Reduced mTORc1 Activity Correlated with Loss of T-bet Expression.

Villegas-Mendez, Ana; Khandelwal, Garima; McGowan, Lucy M; Dookie, Rebecca S; Haley, Michael J; George, Charlotte; Sims, David; Lord, Graham M; Sinclair, Linda V; Jenner, Richard G; Couper, Kevin N.

J Immunol; 205(6): 1608-1619, 2020 09 15.

Artículo en Inglés | MEDLINE | ID: mdl-32817333

12.

Circles in the sea: annual courtship "torus" behaviour of basking sharks Cetorhinus maximus identified in the eastern North Atlantic Ocean.

Sims, David W; Berrow, Simon D; O'Sullivan, Ken M; Pfeiffer, Nicholas J; Collins, Richard; Smith, Kev L; Pfeiffer, Brianna M; Connery, Paul; Wasik, Shane; Flounders, Lois; Queiroz, Nuno; Humphries, Nicolas E; Womersley, Freya C; Southall, Emily J.

J Fish Biol; 101(5): 1160-1181, 2022 Nov.

Artículo en Inglés | MEDLINE | ID: mdl-36073958

13.

Meta-Fish-Lib: A generalised, dynamic DNA reference library pipeline for metabarcoding of fishes.

Collins, Rupert A; Trauzzi, Giulia; Maltby, Katherine M; Gibson, Thomas I; Ratcliffe, Frances C; Hallam, Jane; Rainbird, Sophie; Maclaine, James; Henderson, Peter A; Sims, David W; Mariani, Stefano; Genner, Martin J.

J Fish Biol; 99(4): 1446-1454, 2021 Oct.

Artículo en Inglés | MEDLINE | ID: mdl-34269417

14.

Dominant Mutations in GRM1 Cause Spinocerebellar Ataxia Type 44.

Watson, Lauren M; Bamber, Elizabeth; Schnekenberg, Ricardo Parolin; Williams, Jonathan; Bettencourt, Conceição; Lickiss, Jennifer; Jayawant, Sandeep; Fawcett, Katherine; Clokie, Samuel; Wallis, Yvonne; Clouston, Penny; Sims, David; Houlden, Henry; Becker, Esther B E; Németh, Andrea H.

Am J Hum Genet; 101(3): 451-458, 2017 Sep 07.

Artículo en Inglés | MEDLINE | ID: mdl-28886343

15.

Sequencing depth and coverage: key considerations in genomic analyses.

Sims, David; Sudbery, Ian; Ilott, Nicholas E; Heger, Andreas; Ponting, Chris P.

Nat Rev Genet; 15(2): 121-32, 2014 Feb.

Artículo en Inglés | MEDLINE | ID: mdl-24434847

16.

The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization.

McCormick, Ryan F; Truong, Sandra K; Sreedasyam, Avinash; Jenkins, Jerry; Shu, Shengqiang; Sims, David; Kennedy, Megan; Amirebrahimi, Mojgan; Weers, Brock D; McKinley, Brian; Mattison, Ashley; Morishige, Daryl T; Grimwood, Jane; Schmutz, Jeremy; Mullet, John E.

Plant J; 93(2): 338-354, 2018 01.

Artículo en Inglés | MEDLINE | ID: mdl-29161754

17.

Stem cell modeling of mitochondrial parkinsonism reveals key functions of OPA1.

Jonikas, Mindaugas; Madill, Martin; Mathy, Alexandre; Zekoll, Theresa; Zois, Christos E; Wigfield, Simon; Kurzawa-Akanbi, Marzena; Browne, Cathy; Sims, David; Chinnery, Patrick F; Cowley, Sally A; Tofaris, George K.

Ann Neurol; 83(5): 915-925, 2018 05.

Artículo en Inglés | MEDLINE | ID: mdl-29604226

18.

De novo mutations in GRIN1 cause extensive bilateral polymicrogyria.

Fry, Andrew E; Fawcett, Katherine A; Zelnik, Nathanel; Yuan, Hongjie; Thompson, Belinda A N; Shemer-Meiri, Lilach; Cushion, Thomas D; Mugalaasi, Hood; Sims, David; Stoodley, Neil; Chung, Seo-Kyung; Rees, Mark I; Patel, Chirag V; Brueton, Louise A; Layet, Valérie; Giuliano, Fabienne; Kerr, Michael P; Banne, Ehud; Meiner, Vardiella; Lerman-Sagie, Tally; Helbig, Katherine L; Kofman, Laura H; Knight, Kristin M; Chen, Wenjuan; Kannan, Varun; Hu, Chun; Kusumoto, Hirofumi; Zhang, Jin; Swanger, Sharon A; Shaulsky, Gil H; Mirzaa, Ghayda M; Muir, Alison M; Mefford, Heather C; Dobyns, William B; Mackenzie, Amanda B; Mullins, Jonathan G L; Lemke, Johannes R; Bahi-Buisson, Nadia; Traynelis, Stephen F; Iago, Heledd F; Pilz, Daniela T.

Brain; 141(3): 698-712, 2018 03 01.

Artículo en Inglés | MEDLINE | ID: mdl-29365063

19.

Rationalizing spatial exploration patterns of wild animals and humans through a temporal discounting framework.

Namboodiri, Vijay Mohan K; Levy, Joshua M; Mihalas, Stefan; Sims, David W; Hussain Shuler, Marshall G.

Proc Natl Acad Sci U S A; 113(31): 8747-52, 2016 08 02.

Artículo en Inglés | MEDLINE | ID: mdl-27385831

20.

Ocean-wide tracking of pelagic sharks reveals extent of overlap with longline fishing hotspots.

Queiroz, Nuno; Humphries, Nicolas E; Mucientes, Gonzalo; Hammerschlag, Neil; Lima, Fernando P; Scales, Kylie L; Miller, Peter I; Sousa, Lara L; Seabra, Rui; Sims, David W.

Proc Natl Acad Sci U S A; 113(6): 1582-7, 2016 Feb 09.

Artículo en Inglés | MEDLINE | ID: mdl-26811467

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